Adds the ability to bundle adjust CSM images (#4537)

* copylab

* Initial work toward a working AbstractBundleObservation class

* Fix accidentl add of temporary changes from another project

* Trial 2 on fixing my accidental changes

* csm bundle building properly (#4409)

* Updates for linking and compiling

* Starting virtual functions

* Add virtuals to AbstractBundleObservation and get compiling again

* Remove function from parent

* Get jigsaw tests passing on csmbundle branch (#4413)

* Add virtuals to AbstractBundleObservation and get compiling again

* Remove function from parent

* Get existing jigsaw tests passing

* Remove unneeded functions from BundleObservation

* Clean up a bit more

* Clean up BundleObservation and AbstractBundleObservation more

* Remove unneeded BodyRotation

* Add target body solve back into bundle adjusment calc

* Remove debug output

* Removed unneeded memeber variables BundleObservation

Co-authored-by: Kristin Berry <kberry@gyro.wr.usgs.gov>

* Move some functions to pure virtual

* Csmobservation (#4419)

* Now compiling

* Updated CSMCamera tests and docs

* Remove duplicated member variables and accesor functions from BundleObservation and add Csm camera type to Camera enum

* Remove commented-out code

* Added required headers from removed ground map header (#4427)

* last missing header (#4428)

* Moved CSM settings into BOSS

* Generates Serial Numbers using CSM label information (#4437)

* Creates Serial Numbers using CSM label information

* Updated second SerialNumberList:add function to accommodate CSM label

* Add hooks for csm bundle settings to jigsaw (#4438)

* In progress

* Added tests and Pvl support

* Add missing 'y' to docs

Co-authored-by: Kristin Berry <kberry@usgs.gov>

* Moves partial calculation into CSM and ISIS observation classes. (#4436)

* Remove duplicated member variables and accesor functions from BundleObservation and add Csm camera type to Camera enum

* Remove commented-out code

* Imagecoeff migrated into BundleObservation class working

* Get base level working for all coeffs in ISIS

* Fix accidental move into if statement to get tests passing again

* Updated RHS for CsmBundleObservation to work

* Adds point3D support to CSM Camera observations and also adds ground Partials member function to CSMCamera

* Draft of sensor partials code

* Add docs, some fixes based on review requests

* move computation of weights and observation values to bundle observations

* Add observationvalue function to CsmBundleObservation and move the weighting that it is possible to to the observation classes

* Make CSMSolveSet an optional parameter to get jigsaw tests passing again

* cleanup

* Move observation weights into MLE if block

Co-authored-by: Kristin Berry <kberry@gyro.wr.usgs.gov>

* Implemented bundleOutputString for CSM (#4444)

* Added test for CSM bundleOutputString

* Passing unit test and updates to bundleOutputString

* Addressed PR feedback

* Csmcsv (#4446)

* CSM CSV output

* Small test clean-up

* typo fix

* obs header fix

* Remove param list from bo

* Added debug output

* Now reurning

* Fixed unit test

* xml save test update

* Clean up bundleresults unit test output

* Fixed qfile member

* Fixed old path

* Changed header to use param names

* Making separate csvs

* Added reverse on obs by instId

* Trying to fix multiple sensors

* Fixed images header

* More debug

* removed debug outs

* Added terrible imageindex search

* Added held config fix

* Updated for observation test

* Updated jigsaw test makefiles

* Updated with new tests

* Updates Bundle Observation Vector to support Csm observations. (#4457)

* Remove duplicated member variables and accesor functions from BundleObservation and add Csm camera type to Camera enum

* Remove commented-out code

* Imagecoeff migrated into BundleObservation class working

* Get base level working for all coeffs in ISIS

* Fix accidental move into if statement to get tests passing again

* Updated RHS for CsmBundleObservation to work

* Adds point3D support to CSM Camera observations and also adds ground Partials member function to CSMCamera

* Draft of sensor partials code

* Add docs, some fixes based on review requests

* move computation of weights and observation values to bundle observations

* Add observationvalue function to CsmBundleObservation and move the weighting that it is possible to to the observation classes

* Make CSMSolveSet an optional parameter to get jigsaw tests passing again

* cleanup

* Move observation weights into MLE if block

* Added isis vs. csm support to Bundle Observation Vector class to allow jigsaw to proceed past the setup stage for csm networks

* Comment cleanup

* Fix failing unit tests

* Add docs

* Updated based on feedback with potentially temporary fix to get unit tests passing

* Update tests a bit

* Aligned signature definitions and cleaned up

* remove unneeded functions

* More comment cleanup

Co-authored-by: Kristin Berry <kberry@gyro.wr.usgs.gov>

* Jigsaw Test Conversions (sccconfig, scconfigHeld, radar) (#4463)

* Converted jigsaw scconfig tests.

* Added jigsaw radar test

* Updated tests to reflect PR #4446 changes & removed makefile tests

* Updates to scconfig tests

* Gets csm bundle converging (#4464)

* Added cam type checks

* checking csm partials

* Debug partials

* debug corrections

* Fixed index

* Scaled ground partials

* Updated param comparison

* Removed debug out

* Fixes spacing issue in CSM bundleout.txt (#4465)

* Update csm bundlout to have correct spacing for paramter names

* Reverted unintential change

Co-authored-by: Kristin Berry <kberry@gyro.wr.usgs.gov>

* Removed unit-test specific changes I made to the code instead of the unit test

* Add latitudinal partials for CSM (#4468)

* Add latitudinal partials for CSM

* Added test

Co-authored-by: Jesse Mapel <jmapel@usgs.gov>

* Csm clean up (#4483)

* Added cms index list error

* Added CSMCameraTests for partials

* Observation clean-up

* Cleaned up vector

* Rename BundleObservation classes (#4518)

* rename BundleObservation classes

* omit changes to sip wrappers

* Adds more capabilities to TestCsmModel (#4527)

* Updated to get new isd/state form to test jigsaw parsing

* Add functional image-to-ground, ground-to-image, and isd-parsing to TestCsmModel

* Remove temporary csminit test changes

* Updated variable name for clarity

* add csm info to app docs for csminit and jigsaw

* Csmbundle - remove SIP wrappers and deprecated formatBundleOutputString (#4526)

* remove sip wrappers

* remove deprecated formatBundleOutputString

* remove more sip code and formatBundleOutputString

* Fix functional tests to work with updated TestCsmModel (#4534)

* Tests + test data for CSM jigsaw (#4530)

* Removed debug couts

* Added csmnetwork test fixture

* Added a test for CSM test network

* Adjusted trig functions + added deg/rad conversions

* Initial CSMNetwork data

* Uncommented code

* Removed network path and control network from CSMNetwork fixture

* Removed temporary path from csv comparison

* Adjusted spacing + responded to PR feedback

Co-authored-by: Austin Sanders <arsanders@ugs.gov>

* Added the ability to update CSM model state in jigsaw (#4529)

* Added the ability to update CSM model state in jigsaw

* Added missing function docs

* Updated CSM jigsaw test to check apply

* Wrangled up an F

* Added changelog entry

* General clean-up

* Changed Camera local photometric calculations to not use bodyrotation

* Changed csm camera to save look on non-intersection

* Fixed docs typos

Co-authored-by: Kristin Berry <kberry@gyro.wr.usgs.gov>
Co-authored-by: Kristin Berry <kberry@usgs.gov>
Co-authored-by: Amy Stamile <74275278+amystamile-usgs@users.noreply.github.com>
Co-authored-by: Tim Giroux <62255438+tgiroux@users.noreply.github.com>
Co-authored-by: Tim Giroux <tgiroux@contractor.usgs.gov>
Co-authored-by: AustinSanders <arsanders@usgs.gov>
Co-authored-by: Austin Sanders <arsanders@ugs.gov>