addLogGroup Depricated (#5511)

* Fixed app logging for all call able apps

* Exposed error formatting and file line reporting flags on preference class

* Updates IException to use the exposed Preference flags

* Application handles adding program name to error

* Initial round of test fixes

* Fixed last 3 failing gtests

* Fixed AppendAndLog function uses

* Caught another missused AppendAndLog call

* Fixed last failing gtest

* Fixed output from getsn

* Fixed mosrange test failures

* Removed depricated method from PvlObject

* Update recent app conversions to use the new function

* Fixed additional addLogGroup calls